TBSeek - Detection of Mycobacterium and Drug Resistance Genes

TBSeek - Detection of Mycobacterium and Drug Resistance Genes

① Background

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According to the World Health Organization’s tuberculosis statistics, in 2022, 30 high-burden countries accounted for 87% of new tuberculosis cases. Bangladesh, China, the Democratic Republic of the Congo, India, Indonesia, Nigeria, Pakistan, and the Philippines accounted for two-thirds of the total. Drug-resistant tuberculosis remains a public health crisis and a threat to global health security. In 2022, only about two-fifths of people with drug-resistant tuberculosis received treatment. In some cases, if treatment is inadequate, more severe forms of drug-resistant tuberculosis may arise. Pre-XDR-TB and XDR-TB are types of tuberculosis that respond less to available drugs. Traditional microbiological diagnostic methods are the gold standard for clinical Mycobacterium tuberculosis detection. However, they have high false-negative/false-positive rates, low sensitivity and specificity, and cannot distinguish between tuberculosis and nontuberculous mycobacteria, and are time-consuming. Traditional infectious disease diagnostics are challenging, and there is an urgent need for rapid, comprehensive, and accurate methods for pathogen and drug resistance testing.


 Technology

Based on the nano-pore sequencing platform and the super-multiple PCR technology, an independently developed project was established for targeted detection of Mycobacterium tuberculosis complex and non-tuberculous mycobacteria. It can detect Mycobacterium tuberculosis complex, 40 kinds of non-tuberculous mycobacteria (including 17 kinds most often encountered in clinic), 6 drug resistance genes related to 4 first-line tuberculosis drugs, and 13 drug resistance genes related to 11 second-line tuberculosis drugs at the same time.

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 Detection range

A. Mycobacterium tuberculosis complex (MTBC), including Mycobacterium tuberculosis, Mycobacterium africanum, Mycobacterium bovis, etc.

B. 40 species of nontuberculous mycobacteria (NTM), focusing on the 17 species most commonly encountered in the clinical environment.

C. Six resistance genes associated with four first-line tuberculosis drugs. Thirteen resistance genes associated with eleven second-line tuberculosis drugs.

Mycobacterium tuberculosis complex (MTBC)

Mycobacterium tuberculosis

Mycobacterium bovis

Mycobacterium africanum

Mycobacterium canettii

Mycobacterium caprae

Mycobacterium microti

Mycobacterium pinnipedii

Mycobacterium mungi

Mycobacterium orygis


Non-tuberculous mycobacteria (NTM)

Mycobacterium avium complex (MAC)

Mycobacterium kansasii

Mycobacterium abscessus

Mycobacterium fortuitum

Mycobacterium chelonae

Mycobacterium marinum

Mycobacterium xenopi

Mycobacterium gordonae

Mycobacterium szulgai

Mycobacterium haemophilum

Mycobacterium scrofulaceum

Mycobacterium malmoense

Mycobacterium simiae

Mycobacterium goodii

Mycobacterium mucogenicum

Mycobacterium genavense

Mycobacterium peregrinum

Mycobacterium terrae

Mycobacterium triplex

Mycobacterium wolinskyi

The above table only shows a part of the testing scope.

 

④ Applicable people